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Statistical Methods for High-throughput Genomic Data I
Statistical Methods for High-throughput Genomic Data I
  • Syllabus
  • Classes
Class details
Class sessions
  • Introduction
  • Git and GitHub
  • Genomics
  • Bioconductor
  • RNA-seq
  • Differential Expression
  • Functional enrichment

RNA-seq

Materials from class on Monday, September 22, 2025

RNA-seq sequencing

Lecture slides in HTML format

Lecture slides in HTML format

Lecture slides in HTML format

Lecture slides in HTML format

Normalization

Lecture slides in HTML format

Lecture slides in HTML format

Code examples

  • Demo00_log2, Rmd, HTML
  • Demo01_loess, Rmd, HTML
  • Demo02_quantile_norm, Rmd, HTML
  • Demo03_MA_TMM, Rmd, HTML
  • Demo04_ComBat_SVA, Rmd, HTML (Data preparation scripts)

Last updated on October 6, 2025

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BIOS 658: Statistical Methods for High-throughput Genomic Data I (Fall 2025)
Virginia Commonwealth University    Biostatistics Graduate Program

Mikhail Dozmorov, Ph.D.    mdozmorov@vcu.edu

Monday, Wednesday    1:00pm – 2:20pm
In person, 2201

All content licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.

Content 2025 MGD

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